Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| s-methyl-5-thioribose kinase | EXZ48_29955 | Not Available | - | 6200864 - 6202135 | 47704.1 |
| sugar abc transporter atp-binding protein | EXZ48_29960 | Not Available | + | 6202282 - 6203796 | 54119.3 |
| abc transporter permease | EXZ48_29965 | Not Available | + | 6203886 - 6204842 | 32890.5 |
| sugar abc transporter substrate-binding protein | EXZ48_29970 | Not Available | + | 6204889 - 6205932 | 37078.3 |
| type ii toxin-antitoxin system rele/pare family toxin | EXZ48_29975 | Not Available | + | 6206045 - 6206356 | 12017.5 |
| bifunctional aldolase/short-chain dehydrogenase | EXZ48_29980 | Not Available | - | 6206409 - 6208463 | 72832.4 |
| sugar-binding transcriptional regulator | EXZ48_29985 | Not Available | - | 6208522 - 6209487 | 35202.4 |
| sdr family oxidoreductase | EXZ48_29990 | Not Available | - | 6209674 - 6210414 | 25057.7 |
| tetr/acrr family transcriptional regulator | EXZ48_29995 | Not Available | + | 6210514 - 6211167 | 22935.2 |
| duf2000 domain-containing protein | EXZ48_30000 | Not Available | - | 6211130 - 6211546 | 14777.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.