Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | EXZ48_29905 | Not Available | - | 6191855 - 6192412 | 19693.8 |
| hypothetical protein | EXZ48_29910 | Not Available | - | 6192568 - 6193284 | 24735.5 |
| marr family transcriptional regulator | EXZ48_29915 | Not Available | - | 6193320 - 6193967 | 23322.7 |
| duf4360 domain-containing protein | EXZ48_29920 | Not Available | - | 6194122 - 6195567 | 50632.6 |
| duf4360 domain-containing protein | EXZ48_29925 | Not Available | - | 6195619 - 6196215 | 21287.2 |
| hypothetical protein | EXZ48_29930 | Not Available | + | 6196444 - 6196701 | 9259.27 |
| transcriptional regulator | EXZ48_29935 | Not Available | - | 6196711 - 6197829 | 39093.9 |
| transketolase | EXZ48_29940 | Not Available | - | 6197829 - 6198830 | 36309.9 |
| transketolase | EXZ48_29945 | Not Available | - | 6198833 - 6199768 | 33713.3 |
| s-methyl-5-thioribose-1-phosphate isomerase | EXZ48_29950 | Not Available | - | 6199773 - 6200867 | 39645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.