Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29855 | Not Available | - | 6185375 - 6185602 | 8342.0 |
| group iii truncated hemoglobin | EXZ48_29860 | Not Available | - | 6185671 - 6186138 | 17513.3 |
| duf2189 domain-containing protein | EXZ48_29865 | Not Available | - | 6186135 - 6186920 | 28208.4 |
| hypothetical protein | EXZ48_29870 | Not Available | - | 6186936 - 6187145 | 7128.54 |
| cytochrome-c oxidase, cbb3-type subunit iii | EXZ48_29875 | Not Available | - | 6187142 - 6188020 | 31356.0 |
| ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperone | EXZ48_29880 | Not Available | - | 6188024 - 6188194 | 6337.59 |
| cytochrome-c oxidase, cbb3-type subunit ii | EXZ48_29885 | Not Available | - | 6188199 - 6188930 | 26679.7 |
| cytochrome-c oxidase, cbb3-type subunit i | EXZ48_29890 | Not Available | - | 6188933 - 6190597 | 61936.8 |
| rrf2 family transcriptional regulator | EXZ48_29895 | Not Available | - | 6190612 - 6191055 | 15720.3 |
| mosc domain-containing protein | EXZ48_29900 | Not Available | - | 6191169 - 6191858 | 25126.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.