Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_02010 | Not Available | + | 437671 - 438063 | 13662.7 |
| rna methyltransferase | EXZ48_02015 | Not Available | + | 438070 - 438900 | 28616.5 |
| hypothetical protein | EXZ48_02020 | Not Available | - | 438938 - 439321 | 13325.7 |
| hypothetical protein | EXZ48_02025 | Not Available | - | 439347 - 440495 | 42313.8 |
| duf1134 domain-containing protein | EXZ48_02030 | Not Available | - | 440633 - 441232 | 21109.4 |
| histidine phosphotransferase | EXZ48_02035 | Not Available | + | 441431 - 442084 | 22911.5 |
| response regulator | EXZ48_02040 | Not Available | + | 442200 - 442562 | 13166.3 |
| response regulator transcription factor | EXZ48_02045 | Not Available | - | 442719 - 443417 | 25798.3 |
| flagellar export protein flij | EXZ48_02050 | Not Available | + | 443945 - 444295 | 13424.0 |
| n-acetyltransferase | EXZ48_02055 | Not Available | - | 444374 - 444655 | 10240.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.