Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit b | EXZ48_29805 | Not Available | - | 6178328 - 6178813 | 17425.9 |
| f0f1 atp synthase subunit b | EXZ48_29810 | Not Available | - | 6178824 - 6179477 | 22558.4 |
| f0f1 atp synthase subunit c | EXZ48_29815 | Not Available | - | 6179565 - 6179792 | 7593.37 |
| f0f1 atp synthase subunit a | EXZ48_29820 | Not Available | - | 6179859 - 6180611 | 26786.6 |
| f0f1 atp synthase assembly protein | EXZ48_29825 | Not Available | - | 6180673 - 6181068 | 13784.5 |
| cell wall hydrolase | EXZ48_29830 | Not Available | - | 6181329 - 6182687 | 49854.9 |
| recombinase family protein | EXZ48_29835 | Not Available | + | 6182735 - 6183418 | 25028.6 |
| is630 family transposase | EXZ48_29840 | Not Available | + | 6183617 - 6183825 | 7883.53 |
| hypothetical protein | EXZ48_29845 | Not Available | - | 6183838 - 6184098 | 9662.83 |
| murr/rpir family transcriptional regulator | EXZ48_29850 | Not Available | + | 6184494 - 6185357 | 31381.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.