Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdenum cofactor biosynthesis protein b | EXZ48_29755 | Not Available | + | 6170731 - 6171279 | 19884.6 |
| calcium-binding protein | EXZ48_29760 | Not Available | + | 6171357 - 6172349 | 33658.5 |
| glycosyl transferase | EXZ48_29765 | Not Available | - | 6172386 - 6172916 | 19023.0 |
| pa0069 family radical sam protein | EXZ48_29770 | Not Available | + | 6173088 - 6174245 | 43274.6 |
| ribonuclease hii | EXZ48_29775 | Not Available | + | 6174483 - 6175151 | 23849.9 |
| arsr family transcriptional regulator | EXZ48_29780 | Not Available | + | 6175229 - 6175543 | 11792.2 |
| polyketide cyclase | EXZ48_29785 | Not Available | + | 6175540 - 6175899 | 13219.6 |
| atp-dependent clp protease proteolytic subunit | EXZ48_29790 | Not Available | + | 6175943 - 6176566 | 23379.4 |
| yafy family transcriptional regulator | EXZ48_29795 | Not Available | - | 6176601 - 6177287 | 26028.8 |
| dmt family transporter | EXZ48_29800 | Not Available | + | 6177366 - 6178250 | 31719.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.