Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29700 | Not Available | + | 6159929 - 6160126 | 6918.75 |
| sdr family oxidoreductase | EXZ48_29705 | Not Available | - | 6160184 - 6160888 | 24567.3 |
| transcriptional regulator gcva | EXZ48_29710 | Not Available | + | 6161029 - 6161931 | 33315.2 |
| glycine--trna ligase subunit alpha | EXZ48_29715 | Not Available | - | 6161958 - 6162920 | 35845.3 |
| nad-dependent epimerase/dehydratase family protein | EXZ48_29720 | Not Available | - | 6163013 - 6164089 | 38629.8 |
| hypothetical protein | EXZ48_29725 | Not Available | - | 6164352 - 6164543 | 7315.75 |
| duf2007 domain-containing protein | EXZ48_29735 | Not Available | - | 6166328 - 6166549 | 8030.8 |
| polyprenyl synthetase family protein | EXZ48_29740 | Not Available | + | 6166658 - 6167674 | 36513.9 |
| tetratricopeptide repeat protein | EXZ48_29745 | Not Available | + | 6167985 - 6169826 | 67506.4 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | EXZ48_29750 | Not Available | + | 6169833 - 6170744 | 30928.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.