Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mipa/ompv family protein | EXZ48_29650 | Not Available | - | 6150142 - 6150927 | 27960.0 |
| hypothetical protein | EXZ48_29655 | Not Available | + | 6151120 - 6151359 | 8889.6 |
| phosphoribosylamine--glycine ligase | EXZ48_29660 | Not Available | + | 6151507 - 6152778 | 43916.5 |
| hypothetical protein | EXZ48_29665 | Not Available | + | 6152884 - 6153360 | 16550.5 |
| duf523 domain-containing protein | EXZ48_29670 | Not Available | - | 6153463 - 6153957 | 17112.4 |
| glycine--trna ligase subunit beta | EXZ48_29675 | Not Available | - | 6153971 - 6156085 | 76595.1 |
| polyketide cyclase | EXZ48_29680 | Not Available | - | 6156270 - 6156749 | 17187.3 |
| arsr family transcriptional regulator | EXZ48_29685 | Not Available | - | 6156746 - 6157081 | 12424.1 |
| duf2207 domain-containing protein | EXZ48_29690 | Not Available | - | 6157221 - 6159164 | 69746.0 |
| lema family protein | EXZ48_29695 | Not Available | - | 6159179 - 6159727 | 20177.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.