Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29600 | Not Available | + | 6137138 - 6138232 | 39929.5 |
| hybrid-cluster nad(p)-dependent oxidoreductase | EXZ48_29605 | Not Available | - | 6138261 - 6139364 | 40470.6 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | EXZ48_29610 | Not Available | - | 6139366 - 6140610 | 47326.8 |
| hypothetical protein | EXZ48_29615 | Not Available | + | 6141194 - 6141814 | 23993.7 |
| diguanylate cyclase | EXZ48_29620 | Not Available | - | 6141831 - 6142904 | 38590.2 |
| threonylcarbamoyl-amp synthase | EXZ48_29625 | Not Available | + | 6143056 - 6144030 | 33666.6 |
| fad-binding oxidoreductase | EXZ48_29630 | Not Available | + | 6144093 - 6145523 | 50340.5 |
| duf1217 domain-containing protein | EXZ48_29635 | Not Available | - | 6145628 - 6147949 | 84637.3 |
| hypothetical protein | EXZ48_29640 | Not Available | + | 6148212 - 6148775 | 20853.3 |
| 4-hydroxybenzoate octaprenyltransferase | EXZ48_29645 | Not Available | - | 6149112 - 6150065 | 34488.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.