Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease | EXZ48_29500 | Not Available | - | 6118752 - 6120023 | 44520.0 |
| trap transporter small permease | EXZ48_29505 | Not Available | - | 6120020 - 6120556 | 19588.7 |
| fcd domain-containing protein | EXZ48_29510 | Not Available | + | 6120814 - 6121440 | 24025.0 |
| fad-dependent oxidoreductase | EXZ48_29515 | Not Available | - | 6121574 - 6122905 | 49235.4 |
| sigma-70 family rna polymerase sigma factor | EXZ48_29520 | Not Available | + | 6123042 - 6123680 | 24010.7 |
| transcriptional regulator | EXZ48_29525 | Not Available | + | 6123677 - 6124330 | 23172.1 |
| duf1295 domain-containing protein | EXZ48_29530 | Not Available | + | 6124334 - 6125143 | 29193.6 |
| class i sam-dependent methyltransferase | EXZ48_29535 | Not Available | + | 6125140 - 6126177 | 39122.1 |
| hypothetical protein | EXZ48_29540 | Not Available | + | 6126174 - 6126773 | 21219.1 |
| duf2177 family protein | EXZ48_29545 | Not Available | - | 6126738 - 6127139 | 13979.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.