Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EXZ48_29395 | Not Available | - | 6096879 - 6097727 | 32233.3 |
| ferredoxin reductase | EXZ48_29400 | Not Available | - | 6097727 - 6098932 | 41818.1 |
| sugar abc transporter substrate-binding protein | EXZ48_29405 | Not Available | - | 6098982 - 6099926 | 32705.7 |
| rieske family ferredoxin | EXZ48_29410 | Not Available | - | 6100003 - 6100314 | 11304.4 |
| sterol desaturase family protein | EXZ48_29415 | Not Available | - | 6100311 - 6101345 | 39833.9 |
| laci family dna-binding transcriptional regulator | EXZ48_29420 | Not Available | - | 6101517 - 6102518 | 36617.4 |
| methyl-accepting chemotaxis protein | EXZ48_29430 | Not Available | - | 6103755 - 6105689 | 68822.6 |
| lysr family transcriptional regulator | EXZ48_29435 | Not Available | - | 6106079 - 6106990 | 33812.8 |
| c4-dicarboxylate abc transporter | EXZ48_29440 | Not Available | + | 6107138 - 6108142 | 36731.1 |
| trap transporter small permease | EXZ48_29445 | Not Available | + | 6108195 - 6108812 | 22602.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.