Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| porin family protein | EXZ48_01960 | Not Available | + | 423964 - 424797 | 29527.5 |
| phosphoserine transaminase | EXZ48_01965 | Not Available | + | 424975 - 426156 | 42594.9 |
| phosphoglycerate dehydrogenase | EXZ48_01970 | Not Available | + | 426237 - 427832 | 56301.3 |
| hamp domain-containing protein | EXZ48_01975 | Not Available | - | 427914 - 429725 | 64854.7 |
| dmt family transporter | EXZ48_01980 | Not Available | - | 429861 - 430754 | 32500.5 |
| adenylosuccinate synthase | EXZ48_01985 | Not Available | + | 430978 - 432273 | 46554.5 |
| hypothetical protein | EXZ48_01990 | Not Available | + | 432343 - 434547 | 76949.8 |
| lyse family translocator | EXZ48_01995 | Not Available | + | 434739 - 435353 | 21079.8 |
| rna polymerase sigma factor rpoh | EXZ48_02000 | Not Available | - | 435448 - 436353 | 34560.4 |
| rlua family pseudouridine synthase | EXZ48_02005 | Not Available | - | 436610 - 437635 | 37149.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.