Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29285 | Not Available | + | 6070675 - 6070995 | 11269.5 |
| response regulator transcription factor | EXZ48_29290 | Not Available | - | 6071104 - 6071982 | 31867.6 |
| response regulator | EXZ48_29295 | Not Available | + | 6072390 - 6076697 | 156708.0 |
| hypothetical protein | EXZ48_29300 | Not Available | + | 6077012 - 6077299 | 10591.6 |
| is5 family transposase | EXZ48_29315 | Not Available | - | 6078604 - 6079048 | 16962.8 |
| fad-dependent tricarballylate dehydrogenase tcua | EXZ48_29320 | Not Available | + | 6079327 - 6080748 | 51164.2 |
| tricarballylate utilization 4fe-4s protein tcub | EXZ48_29325 | Not Available | + | 6080745 - 6081878 | 41364.8 |
| smc-scp complex subunit scpb | EXZ48_29330 | Not Available | - | 6082131 - 6082817 | 25086.0 |
| duf1403 family protein | EXZ48_29335 | Not Available | - | 6082820 - 6083773 | 33635.5 |
| penicillin-binding protein 2 | EXZ48_29340 | Not Available | + | 6084051 - 6085811 | 63828.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.