Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | EXZ48_29185 | Not Available | - | 6045674 - 6046561 | 30894.6 |
| abc transporter atp-binding protein | EXZ48_29190 | Not Available | - | 6046584 - 6047318 | 25972.0 |
| abc transporter substrate-binding protein | EXZ48_29195 | Not Available | - | 6047405 - 6048559 | 39755.5 |
| branched-chain amino acid abc transporter atp-binding protein/permease | EXZ48_29200 | Not Available | - | 6048579 - 6050453 | 65682.8 |
| murr/rpir family transcriptional regulator | EXZ48_29205 | Not Available | + | 6050621 - 6051502 | 32758.2 |
| cysteine hydrolase | EXZ48_29210 | Not Available | + | 6051546 - 6052208 | 24588.3 |
| glutamine synthetase | EXZ48_29215 | Not Available | + | 6052231 - 6053577 | 48441.5 |
| n-formylglutamate amidohydrolase | EXZ48_29220 | Not Available | + | 6053589 - 6054407 | 30231.2 |
| aspartate aminotransferase family protein | EXZ48_29225 | Not Available | + | 6054407 - 6055717 | 45773.2 |
| glycosyl transferase | EXZ48_29230 | Not Available | - | 6056904 - 6065510 | 312378.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.