Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29135 | Not Available | - | 6036239 - 6036871 | 22639.5 |
| hypothetical protein | EXZ48_29140 | Not Available | + | 6037074 - 6037475 | 14017.0 |
| crp/fnr family transcriptional regulator | EXZ48_29145 | Not Available | + | 6037567 - 6038241 | 24621.2 |
| pepsy domain-containing protein | EXZ48_29150 | Not Available | + | 6038265 - 6039677 | 50422.0 |
| copper chaperone pcu(a)c | EXZ48_29155 | Not Available | + | 6039708 - 6040628 | 32087.3 |
| sco family protein | EXZ48_29160 | Not Available | + | 6040625 - 6041212 | 21559.1 |
| hd-gyp domain-containing protein | EXZ48_29165 | Not Available | - | 6041301 - 6042698 | 50890.1 |
| anti-sigma factor | EXZ48_29170 | Not Available | - | 6042839 - 6043552 | 25402.2 |
| sigma-70 family rna polymerase sigma factor | EXZ48_29175 | Not Available | - | 6043549 - 6044100 | 20866.0 |
| duf4394 domain-containing protein | EXZ48_29180 | Not Available | + | 6044377 - 6045165 | 27427.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.