Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29085 | Not Available | - | 6025512 - 6025892 | 14038.5 |
| hypothetical protein | EXZ48_29090 | Not Available | - | 6025923 - 6026147 | 8214.57 |
| cold-shock protein | EXZ48_29095 | Not Available | - | 6026268 - 6026477 | 7438.82 |
| histidine kinase | EXZ48_29100 | Not Available | - | 6026850 - 6027851 | 36177.0 |
| response regulator | EXZ48_29105 | Not Available | + | 6028016 - 6031126 | 114317.0 |
| duf982 domain-containing protein | EXZ48_29110 | Not Available | - | 6031592 - 6031840 | 9013.18 |
| duf982 domain-containing protein | EXZ48_29115 | Not Available | - | 6032159 - 6032461 | 11523.0 |
| copper resistance protein copc | EXZ48_29120 | Not Available | - | 6033347 - 6034954 | 56472.9 |
| duf1775 domain-containing protein | EXZ48_29125 | Not Available | - | 6035006 - 6035536 | 18887.6 |
| hypothetical protein | EXZ48_29130 | Not Available | - | 6035759 - 6036148 | 13687.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.