Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_29025 | Not Available | + | 6017788 - 6018081 | 10473.0 |
| pepsy domain-containing protein | EXZ48_29030 | Not Available | + | 6018498 - 6018815 | 10759.5 |
| hypothetical protein | EXZ48_29035 | Not Available | + | 6018828 - 6019424 | 20282.6 |
| crp/fnr family transcriptional regulator | EXZ48_29040 | Not Available | + | 6019619 - 6020350 | 27045.7 |
| hypothetical protein | EXZ48_29045 | Not Available | - | 6020824 - 6021317 | 17448.1 |
| hsp20 family protein | EXZ48_29055 | Not Available | - | 6021585 - 6022061 | 17438.6 |
| aspartate-semialdehyde dehydrogenase | EXZ48_29060 | Not Available | - | 6022213 - 6022485 | 10874.9 |
| co-chaperone groes | EXZ48_29065 | Not Available | + | 6022768 - 6023082 | 11349.8 |
| chaperonin groel | EXZ48_29070 | Not Available | + | 6023135 - 6024763 | 57774.7 |
| hypothetical protein | EXZ48_29080 | Not Available | - | 6025139 - 6025414 | 10330.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.