Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EXZ48_28975 | Not Available | + | 6012070 - 6012426 | 12875.9 |
| sdr family oxidoreductase | EXZ48_28980 | Not Available | + | 6012540 - 6013403 | 30524.5 |
| ferritin-like domain-containing protein | EXZ48_28985 | Not Available | - | 6013568 - 6014068 | 18463.1 |
| hypothetical protein | EXZ48_28990 | Not Available | - | 6014156 - 6014338 | 7183.91 |
| hypothetical protein | EXZ48_28995 | Not Available | + | 6014714 - 6014962 | 9292.01 |
| crp/fnr family transcriptional regulator | EXZ48_29000 | Not Available | + | 6015200 - 6015931 | 27359.9 |
| hypothetical protein | EXZ48_29005 | Not Available | - | 6015924 - 6016154 | 8767.31 |
| sigma-70 family rna polymerase sigma factor | EXZ48_29010 | Not Available | + | 6016294 - 6016806 | 19570.7 |
| bon domain-containing protein | EXZ48_29015 | Not Available | + | 6016902 - 6017396 | 18147.6 |
| hypothetical protein | EXZ48_29020 | Not Available | + | 6017487 - 6017717 | 8639.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.