Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | EXZ48_28865 | Not Available | + | 5988755 - 5989048 | 10662.7 |
| n-formylglutamate amidohydrolase | EXZ48_28870 | Not Available | + | 5989676 - 5990506 | 31421.7 |
| flavohemoglobin expression-modulating qegla motif protein | EXZ48_28875 | Not Available | + | 5990503 - 5992350 | 66961.2 |
| glutathione synthase | EXZ48_28880 | Not Available | + | 5992360 - 5993406 | 37869.5 |
| glycogen debranching enzyme glgx | EXZ48_28885 | Not Available | + | 5993597 - 5995678 | 76845.7 |
| dna topoisomerase ib | EXZ48_28890 | Not Available | + | 5995687 - 5996757 | 39733.9 |
| sdr family oxidoreductase | EXZ48_28895 | Not Available | + | 5996769 - 5997551 | 26958.2 |
| duf296 domain-containing protein | EXZ48_28900 | Not Available | + | 5997625 - 5998065 | 15932.2 |
| hypothetical protein | EXZ48_28905 | Not Available | + | 5998087 - 5998308 | 8244.99 |
| ku protein | EXZ48_28910 | Not Available | + | 5998308 - 5999105 | 29900.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.