Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate-semialdehyde dehydrogenase | EXZ48_28800 | Not Available | + | 5978073 - 5978345 | 10887.8 |
| hypothetical protein | EXZ48_28805 | Not Available | + | 5978440 - 5978730 | 10887.0 |
| hsp20 family protein | EXZ48_28810 | Not Available | + | 5978978 - 5979451 | 17212.3 |
| duf982 domain-containing protein | EXZ48_28815 | Not Available | + | 5979524 - 5979823 | 10937.2 |
| is110 family transposase | EXZ48_28825 | Not Available | - | 5980500 - 5981534 | 38005.8 |
| tryptophan-rich sensory protein | EXZ48_28835 | Not Available | - | 5982406 - 5982867 | 17472.8 |
| cryptochrome/photolyase family protein | EXZ48_28840 | Not Available | - | 5982934 - 5984472 | 58438.5 |
| lysr family transcriptional regulator | EXZ48_28845 | Not Available | - | 5984876 - 5985802 | 33379.2 |
| fad-binding protein | EXZ48_28850 | Not Available | + | 5985963 - 5987651 | 61579.9 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | EXZ48_28860 | Not Available | + | 5988450 - 5988758 | 11075.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.