Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EXZ48_28745 | Not Available | - | 5967489 - 5968526 | 39141.1 |
| duf1295 domain-containing protein | EXZ48_28750 | Not Available | - | 5968523 - 5969338 | 29287.7 |
| transcriptional regulator | EXZ48_28755 | Not Available | - | 5969342 - 5969995 | 23181.8 |
| sigma-70 family rna polymerase sigma factor | EXZ48_28760 | Not Available | - | 5969992 - 5970630 | 23703.4 |
| fad-dependent oxidoreductase | EXZ48_28765 | Not Available | + | 5970766 - 5972097 | 49082.1 |
| hypothetical protein | EXZ48_28770 | Not Available | + | 5972497 - 5972751 | 9158.01 |
| pas domain s-box protein | EXZ48_28775 | Not Available | - | 5972802 - 5975234 | 89961.6 |
| hypothetical protein | EXZ48_28780 | Not Available | - | 5975397 - 5975618 | 7921.73 |
| chaperonin groel | EXZ48_28790 | Not Available | - | 5975794 - 5977422 | 57903.8 |
| co-chaperone groes | EXZ48_28795 | Not Available | - | 5977483 - 5977797 | 11327.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.