Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine-2,3-aminomutase-like protein | EXZ48_28695 | Not Available | + | 5958771 - 5959832 | 38070.0 |
| gntr family transcriptional regulator | EXZ48_28700 | Not Available | + | 5960057 - 5960761 | 26461.7 |
| dihydrodipicolinate synthase family protein | EXZ48_28705 | Not Available | + | 5960884 - 5961846 | 34598.7 |
| lyse family translocator | EXZ48_28710 | Not Available | + | 5961974 - 5962360 | 13461.8 |
| ferrochelatase | EXZ48_28715 | Not Available | - | 5962761 - 5963804 | 39555.5 |
| class i sam-dependent methyltransferase | EXZ48_28720 | Not Available | - | 5963828 - 5965111 | 47465.0 |
| duf1365 domain-containing protein | EXZ48_28725 | Not Available | - | 5965182 - 5966006 | 30891.7 |
| duf2147 domain-containing protein | EXZ48_28730 | Not Available | - | 5966026 - 5966406 | 13690.5 |
| duf2177 family protein | EXZ48_28735 | Not Available | + | 5966527 - 5966928 | 13953.3 |
| hypothetical protein | EXZ48_28740 | Not Available | - | 5966893 - 5967462 | 20421.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.