Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | EXZ48_28595 | Not Available | + | 5938813 - 5939253 | 16462.0 |
| m20/m25/m40 family metallo-hydrolase | EXZ48_28600 | Not Available | + | 5939371 - 5940762 | 49837.2 |
| upf0104 family protein | EXZ48_28605 | Not Available | + | 5940958 - 5941905 | 34427.1 |
| ba14k family protein | EXZ48_28610 | Not Available | + | 5942007 - 5942447 | 16831.7 |
| penicillin-binding protein | EXZ48_28615 | Not Available | + | 5942656 - 5944869 | 79126.0 |
| hypothetical protein | EXZ48_28620 | Not Available | - | 5944881 - 5945249 | 13633.9 |
| hypothetical protein | EXZ48_28625 | Not Available | - | 5945254 - 5945973 | 26892.2 |
| molecular chaperone dnak | EXZ48_28630 | Not Available | + | 5946443 - 5948353 | 68416.1 |
| molecular chaperone dnaj | EXZ48_28635 | Not Available | + | 5948591 - 5949712 | 40454.7 |
| hypothetical protein | EXZ48_28640 | Not Available | - | 5949790 - 5950026 | 8781.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.