Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_28545 | Not Available | + | 5926697 - 5927587 | 32689.4 |
| gnat family n-acetyltransferase | EXZ48_28550 | Not Available | - | 5927665 - 5928108 | 17093.9 |
| aldo/keto reductase | EXZ48_28555 | Not Available | - | 5928112 - 5929062 | 33742.9 |
| gfo/idh/moca family oxidoreductase | EXZ48_28560 | Not Available | + | 5929222 - 5930208 | 36550.3 |
| peroxiredoxin | EXZ48_28565 | Not Available | - | 5930275 - 5930934 | 23862.5 |
| yigz family protein | EXZ48_28570 | Not Available | - | 5931244 - 5931825 | 20895.9 |
| hypothetical protein | EXZ48_28575 | Not Available | + | 5931979 - 5932167 | 7176.54 |
| glycoside hydrolase family 5 protein | EXZ48_28580 | Not Available | - | 5932264 - 5933262 | 35929.2 |
| abc transporter atp-binding protein | EXZ48_28585 | Not Available | + | 5933569 - 5935377 | 65613.4 |
| dna polymerase i | EXZ48_28590 | Not Available | - | 5935463 - 5938432 | 107610.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.