Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | EXZ48_28495 | Not Available | - | 5915305 - 5916273 | 35838.2 |
| cysteine desulfurase | EXZ48_28500 | Not Available | + | 5916414 - 5917655 | 46155.1 |
| guanine deaminase | EXZ48_28505 | Not Available | + | 5917652 - 5918992 | 48981.2 |
| hypothetical protein | EXZ48_28510 | Not Available | - | 5918993 - 5919289 | 9920.88 |
| iclr family transcriptional regulator | EXZ48_28515 | Not Available | - | 5919436 - 5920263 | 29503.5 |
| glyoxylate carboligase | EXZ48_28520 | Not Available | + | 5920431 - 5922215 | 64428.3 |
| hydroxypyruvate isomerase | EXZ48_28525 | Not Available | + | 5922237 - 5923016 | 28400.8 |
| 2-hydroxy-3-oxopropionate reductase | EXZ48_28530 | Not Available | + | 5923052 - 5923936 | 30759.3 |
| glycerate kinase | EXZ48_28535 | Not Available | + | 5924188 - 5925456 | 43565.2 |
| aldo/keto reductase | EXZ48_28540 | Not Available | - | 5925547 - 5926545 | 35409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.