Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| srpbcc domain-containing protein | EXZ48_28440 | Not Available | - | 5904879 - 5905676 | 29262.3 |
| arsr family transcriptional regulator | EXZ48_28445 | Not Available | - | 5905660 - 5906271 | 21570.7 |
| ureidoglycolate lyase | EXZ48_28450 | Not Available | - | 5906370 - 5906855 | 17681.2 |
| allantoicase | EXZ48_28455 | Not Available | - | 5906852 - 5907868 | 35931.6 |
| allantoinase puue | EXZ48_28460 | Not Available | - | 5907880 - 5909298 | 52808.3 |
| hydroxyisourate hydrolase | EXZ48_28465 | Not Available | + | 5909461 - 5909826 | 13178.6 |
| xanthine dehydrogenase small subunit | EXZ48_28470 | Not Available | + | 5909830 - 5911314 | 52862.7 |
| xanthine dehydrogenase molybdopterin binding subunit | EXZ48_28475 | Not Available | + | 5911318 - 5913684 | 85361.3 |
| xanthine dehydrogenase accessory protein xdhc | EXZ48_28480 | Not Available | + | 5913733 - 5914578 | 29887.4 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | EXZ48_28490 | Not Available | - | 5915013 - 5915267 | 9528.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.