Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | EXZ48_28385 | Not Available | + | 5892971 - 5894143 | 41141.4 |
| abc transporter permease | EXZ48_28390 | Not Available | - | 5894253 - 5895047 | 28986.7 |
| abc transporter permease | EXZ48_28395 | Not Available | - | 5895059 - 5895919 | 31046.9 |
| abc transporter atp-binding protein | EXZ48_28400 | Not Available | - | 5895916 - 5896989 | 38710.8 |
| abc transporter substrate-binding protein | EXZ48_28405 | Not Available | - | 5897110 - 5898165 | 37855.4 |
| rraa family protein | EXZ48_28410 | Not Available | - | 5898224 - 5898886 | 23575.8 |
| carbon-nitrogen hydrolase family protein | EXZ48_28415 | Not Available | - | 5898997 - 5899800 | 29125.7 |
| lysr family transcriptional regulator | EXZ48_28420 | Not Available | - | 5899905 - 5900801 | 32248.3 |
| ybak/ebsc family protein | EXZ48_28430 | Not Available | + | 5902619 - 5903077 | 16013.3 |
| ncs2 family permease | EXZ48_28435 | Not Available | + | 5903408 - 5904700 | 45078.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.