Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | EXZ48_28285 | Not Available | + | 5869447 - 5870793 | 49646.7 |
| resolvase | EXZ48_28290 | Not Available | + | 5870790 - 5871473 | 24747.6 |
| 4-oxalocrotonate tautomerase | EXZ48_28295 | Not Available | + | 5871475 - 5871672 | 7365.04 |
| isochorismatase family protein | EXZ48_28300 | Not Available | + | 5871672 - 5872661 | 37133.6 |
| cytosine deaminase | EXZ48_28305 | Not Available | - | 5872739 - 5874112 | 49547.7 |
| gntr family transcriptional regulator | EXZ48_28310 | Not Available | + | 5874330 - 5875070 | 27025.2 |
| rida family protein | EXZ48_28315 | Not Available | + | 5875094 - 5875561 | 16197.5 |
| gtp-binding protein | EXZ48_28320 | Not Available | + | 5875564 - 5876562 | 35727.9 |
| abc transporter substrate-binding protein | EXZ48_28325 | Not Available | + | 5876895 - 5877890 | 34837.9 |
| abc transporter permease | EXZ48_28330 | Not Available | + | 5877955 - 5878725 | 27885.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.