Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | EXZ48_28235 | Not Available | - | 5857271 - 5858371 | 38561.4 |
| abc transporter permease | EXZ48_28240 | Not Available | - | 5858398 - 5859444 | 36769.2 |
| sugar abc transporter atp-binding protein | EXZ48_28245 | Not Available | - | 5859444 - 5860976 | 54115.3 |
| arac family transcriptional regulator | EXZ48_28250 | Not Available | + | 5861033 - 5861959 | 34190.8 |
| hypothetical protein | EXZ48_28255 | Not Available | - | 5862532 - 5862834 | 11257.3 |
| mandelate racemase | EXZ48_28260 | Not Available | + | 5862973 - 5864133 | 41473.3 |
| aminopeptidase p family protein | EXZ48_28265 | Not Available | + | 5864170 - 5865342 | 42156.2 |
| amidohydrolase | EXZ48_28270 | Not Available | + | 5865455 - 5866894 | 52497.6 |
| nad/nadp octopine/nopaline dehydrogenase | EXZ48_28275 | Not Available | + | 5867475 - 5868563 | 37703.2 |
| serine carboxypeptidase | EXZ48_28280 | Not Available | + | 5868560 - 5869450 | 31819.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.