Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter atp-binding protein | EXZ48_28180 | Not Available | + | 5846107 - 5847624 | 53683.7 |
| abc transporter permease | EXZ48_28185 | Not Available | + | 5847621 - 5848619 | 33524.1 |
| abc transporter permease | EXZ48_28190 | Not Available | + | 5848619 - 5849572 | 32313.5 |
| ribose abc transporter substrate-binding protein | EXZ48_28195 | Not Available | + | 5849601 - 5850539 | 32913.2 |
| sulfite exporter taue/safe family protein | EXZ48_28200 | Not Available | - | 5850736 - 5851521 | 26225.7 |
| mbl fold metallo-hydrolase | EXZ48_28205 | Not Available | - | 5851589 - 5852467 | 31973.4 |
| aminotransferase class v-fold plp-dependent enzyme | EXZ48_28210 | Not Available | - | 5852470 - 5853954 | 52423.9 |
| lrp/asnc family transcriptional regulator | EXZ48_28215 | Not Available | + | 5854050 - 5854535 | 18366.2 |
| l-2-hydroxyglutarate oxidase | EXZ48_28225 | Not Available | - | 5855026 - 5856246 | 43554.1 |
| polysaccharide deacetylase | EXZ48_28230 | Not Available | - | 5856297 - 5857214 | 35104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.