Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette domain-containing protein | EXZ48_28130 | Not Available | - | 5835895 - 5836113 | 7302.83 |
| amino acid abc transporter substrate-binding protein | EXZ48_28135 | Not Available | - | 5836208 - 5837506 | 47127.2 |
| amidase | EXZ48_28140 | Not Available | - | 5837557 - 5838957 | 48280.2 |
| lysr family transcriptional regulator | EXZ48_28145 | Not Available | + | 5839096 - 5840052 | 35102.1 |
| sdr family oxidoreductase | EXZ48_28150 | Not Available | - | 5840225 - 5840971 | 26291.5 |
| aldo/keto reductase | EXZ48_28155 | Not Available | + | 5841101 - 5842129 | 36682.2 |
| altronate dehydratase | EXZ48_28160 | Not Available | - | 5842173 - 5843684 | 53934.3 |
| l-rhamnose mutarotase | EXZ48_28165 | Not Available | - | 5843843 - 5844172 | 12769.2 |
| gntr family transcriptional regulator | EXZ48_28170 | Not Available | - | 5844217 - 5844897 | 25028.9 |
| amidohydrolase | EXZ48_28175 | Not Available | + | 5845111 - 5845941 | 30527.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.