Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1778 domain-containing protein | EXZ48_28075 | Not Available | + | 5829501 - 5829788 | 10608.7 |
| gnat family n-acetyltransferase | EXZ48_28080 | Not Available | + | 5829785 - 5830282 | 18302.2 |
| type i secretion c-terminal target domain-containing protein | EXZ48_28085 | Not Available | + | 5830491 - 5831435 | 33462.2 |
| duf4238 domain-containing protein | EXZ48_28090 | Not Available | - | 5831481 - 5831861 | 14730.3 |
| duf4238 domain-containing protein | EXZ48_28095 | Not Available | - | 5831858 - 5832373 | 19863.9 |
| hypothetical protein | EXZ48_28100 | Not Available | + | 5832504 - 5832767 | 9617.29 |
| relaxase | EXZ48_28105 | Not Available | - | 5832835 - 5834028 | 45382.1 |
| hypothetical protein | EXZ48_28110 | Not Available | - | 5834025 - 5834429 | 14452.7 |
| bifunctional aminoacyl-trna synthetase | EXZ48_28115 | Not Available | - | 5834439 - 5834552 | 4120.87 |
| hypothetical protein | EXZ48_28125 | Not Available | - | 5835071 - 5835379 | 11611.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.