Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | EXZ48_27820 | Not Available | + | 5786297 - 5787178 | 31264.0 |
| cupin domain-containing protein | EXZ48_27825 | Not Available | - | 5787179 - 5787601 | 15386.0 |
| hydroxyacylglutathione hydrolase | EXZ48_27830 | Not Available | - | 5787601 - 5788365 | 27775.1 |
| class i sam-dependent methyltransferase | EXZ48_27835 | Not Available | + | 5788457 - 5789206 | 28023.0 |
| prephenate/arogenate dehydrogenase family protein | EXZ48_27840 | Not Available | + | 5789271 - 5790200 | 33571.0 |
| duf2125 domain-containing protein | EXZ48_27845 | Not Available | - | 5790234 - 5791241 | 34895.5 |
| gamma-glutamylcyclotransferase | EXZ48_27850 | Not Available | + | 5791327 - 5791878 | 20429.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | EXZ48_27855 | Not Available | - | 5791879 - 5792670 | 30283.3 |
| ydcf family protein | EXZ48_27860 | Not Available | - | 5792748 - 5793461 | 25477.8 |
| abc transporter permease | EXZ48_27865 | Not Available | - | 5793532 - 5794539 | 36202.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.