Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | EXZ48_27770 | Not Available | + | 5776931 - 5778064 | 39848.0 |
| cbs domain-containing protein | EXZ48_27775 | Not Available | + | 5778061 - 5778981 | 34216.2 |
| bola family transcriptional regulator | EXZ48_27780 | Not Available | - | 5778982 - 5779263 | 10078.0 |
| molecular chaperone dnaj | EXZ48_27785 | Not Available | + | 5779382 - 5780005 | 23341.5 |
| cobaltochelatase subunit cobs | EXZ48_27790 | Not Available | + | 5780122 - 5781120 | 36883.1 |
| cobaltochelatase subunit cobt | EXZ48_27795 | Not Available | + | 5781137 - 5783038 | 70126.2 |
| hypothetical protein | EXZ48_27800 | Not Available | + | 5783103 - 5784074 | 35503.6 |
| vut family protein | EXZ48_27805 | Not Available | - | 5784133 - 5784771 | 23012.6 |
| 50s ribosomal protein l28 | EXZ48_27810 | Not Available | - | 5784931 - 5785227 | 10705.0 |
| duf3108 domain-containing protein | EXZ48_27815 | Not Available | + | 5785484 - 5786260 | 27746.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.