Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | EXZ48_27720 | Not Available | + | 5763816 - 5764313 | 18321.0 |
| hypothetical protein | EXZ48_27725 | Not Available | + | 5764498 - 5765079 | 21199.0 |
| vitamin b12-dependent ribonucleotide reductase | EXZ48_27730 | Not Available | + | 5765705 - 5769523 | 139215.0 |
| m23 family metallopeptidase | EXZ48_27735 | Not Available | + | 5770054 - 5772012 | 70565.8 |
| response regulator sira | EXZ48_27740 | Not Available | - | 5772110 - 5772358 | 9056.0 |
| murein l,d-transpeptidase | EXZ48_27745 | Not Available | - | 5772355 - 5773857 | 55276.6 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | EXZ48_27750 | Not Available | - | 5774050 - 5775003 | 34777.5 |
| site-specific tyrosine recombinase xerd | EXZ48_27755 | Not Available | - | 5775080 - 5776027 | 34640.7 |
| hypothetical protein | EXZ48_27760 | Not Available | - | 5776024 - 5776173 | 5552.83 |
| shikimate kinase | EXZ48_27765 | Not Available | + | 5776327 - 5776920 | 21724.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.