Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thermonuclease family protein | EXZ48_27230 | Not Available | - | 5700394 - 5700813 | 15473.4 |
| hypothetical protein | EXZ48_27235 | Not Available | - | 5700826 - 5701888 | 40082.7 |
| hypothetical protein | EXZ48_27375 | Not Available | - | 5719503 - 5719742 | 8266.68 |
| duf982 domain-containing protein | EXZ48_27380 | Not Available | + | 5719880 - 5720182 | 11495.0 |
| hypothetical protein | EXZ48_27385 | Not Available | + | 5720261 - 5720632 | 13470.4 |
| hypothetical protein | EXZ48_27390 | Not Available | + | 5720704 - 5720886 | 6576.64 |
| site-specific dna-methyltransferase | EXZ48_27395 | Not Available | - | 5720889 - 5721641 | 28152.6 |
| hypothetical protein | EXZ48_27400 | Not Available | - | 5721638 - 5721823 | 6935.45 |
| c-5 cytosine-specific dna methylase | EXZ48_27405 | Not Available | - | 5721820 - 5723940 | 76395.8 |
| hypothetical protein | EXZ48_27410 | Not Available | - | 5723968 - 5724309 | 13041.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.