Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| metal/formaldehyde-sensitive transcriptional repressor | EXZ48_26920 | Not Available | - | 5634770 - 5635045 | 10358.7 |
| cation transporter | EXZ48_26925 | Not Available | - | 5635076 - 5636059 | 35538.6 |
| s8 family peptidase | EXZ48_26930 | Not Available | - | 5636492 - 5638963 | 90764.2 |
| atp-binding protein | EXZ48_26935 | Not Available | - | 5638963 - 5639967 | 36563.1 |
| duf1612 domain-containing protein | EXZ48_26940 | Not Available | - | 5640141 - 5641274 | 41392.9 |
| tn3 family transposase | EXZ48_26950 | Not Available | - | 5641872 - 5644838 | 110614.0 |
| recombinase family protein | EXZ48_26955 | Not Available | + | 5645004 - 5645585 | 21177.5 |
| hypothetical protein | EXZ48_26960 | Not Available | - | 5645654 - 5646073 | 14392.9 |
| hypothetical protein | EXZ48_26965 | Not Available | - | 5646194 - 5649181 | 112301.0 |
| hypothetical protein | EXZ48_26970 | Not Available | - | 5649178 - 5649450 | 9935.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.