Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | EXZ48_26315 | Not Available | + | 5548076 - 5549551 | 54136.6 |
| hypothetical protein | EXZ48_26320 | Not Available | + | 5549561 - 5550061 | 17766.2 |
| alkylhydroperoxidase | EXZ48_26325 | Not Available | + | 5550058 - 5550633 | 20824.9 |
| xre family transcriptional regulator | EXZ48_26330 | Not Available | + | 5550675 - 5551286 | 21498.7 |
| nad/nadp octopine/nopaline dehydrogenase | EXZ48_26335 | Not Available | + | 5551335 - 5552417 | 38029.4 |
| glycine c-acetyltransferase | EXZ48_26340 | Not Available | + | 5552572 - 5552690 | 4292.13 |
| Trna-thr | Not Available | Not Available | + | 5552753 - 5552828 | Not Available |
| lysr family transcriptional regulator | EXZ48_26350 | Not Available | - | 5552882 - 5553829 | 34646.0 |
| fmn-dependent nadh-azoreductase | EXZ48_26355 | Not Available | + | 5553961 - 5554584 | 21971.4 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | EXZ48_26360 | Not Available | - | 5554656 - 5555531 | 31568.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.