Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysine 6-monooxygenase | EXZ48_26265 | Not Available | - | 5532729 - 5534048 | 48291.3 |
| amino acid adenylation domain-containing protein | EXZ48_26270 | Not Available | - | 5534073 - 5538011 | 141827.0 |
| n-acetyltransferase | EXZ48_26275 | Not Available | + | 5538319 - 5539464 | 41838.0 |
| mate family efflux transporter | EXZ48_26280 | Not Available | + | 5539464 - 5540828 | 46175.1 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | EXZ48_26285 | Not Available | + | 5540844 - 5542019 | 42856.2 |
| diaminopimelate decarboxylase | EXZ48_26290 | Not Available | + | 5542108 - 5543331 | 44331.8 |
| extracellular solute-binding protein | EXZ48_26295 | Not Available | + | 5543832 - 5544941 | 41338.2 |
| abc transporter permease | EXZ48_26300 | Not Available | + | 5545099 - 5546085 | 35746.9 |
| abc transporter permease | EXZ48_26305 | Not Available | + | 5546085 - 5546879 | 28926.5 |
| abc transporter atp-binding protein | EXZ48_26310 | Not Available | + | 5546879 - 5547964 | 39542.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.