Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_26215 | Not Available | - | 5522047 - 5522775 | 26323.3 |
| abc transporter substrate-binding protein | EXZ48_26220 | Not Available | - | 5522830 - 5524101 | 45187.3 |
| 3-hydroxyacyl-coa dehydrogenase family protein | EXZ48_26225 | Not Available | - | 5524169 - 5525077 | 32501.2 |
| sdr family oxidoreductase | EXZ48_26230 | Not Available | - | 5525074 - 5525880 | 27853.4 |
| cupin domain-containing protein | EXZ48_26235 | Not Available | - | 5525877 - 5526227 | 12481.9 |
| cyclase family protein | EXZ48_26240 | Not Available | - | 5526336 - 5527175 | 31482.4 |
| 2-hydroxyacid dehydrogenase | EXZ48_26245 | Not Available | - | 5527425 - 5528390 | 33585.3 |
| tonb-dependent siderophore receptor | EXZ48_26250 | Not Available | - | 5528841 - 5530970 | 77818.5 |
| sigma-70 family rna polymerase sigma factor | EXZ48_26255 | Not Available | - | 5531264 - 5531854 | 22139.4 |
| 4'-phosphopantetheinyl transferase superfamily protein | EXZ48_26260 | Not Available | - | 5532003 - 5532728 | 26652.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.