Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | EXZ48_25735 | Not Available | - | 5449390 - 5450070 | 24533.2 |
| abc transporter substrate-binding protein | EXZ48_25740 | Not Available | - | 5450042 - 5451016 | 33660.7 |
| pqq-dependent dehydrogenase, methanol/ethanol family | EXZ48_25745 | Not Available | + | 5451220 - 5452986 | 63757.1 |
| response regulator transcription factor | EXZ48_25750 | Not Available | + | 5453064 - 5453786 | 26155.3 |
| gfdt protein | EXZ48_25755 | Not Available | + | 5453929 - 5455125 | 42817.6 |
| response regulator | EXZ48_25760 | Not Available | + | 5455122 - 5457311 | 79550.6 |
| pseudoazurin | EXZ48_25765 | Not Available | + | 5457386 - 5457823 | 15339.7 |
| plasmid partitioning protein repa | EXZ48_25770 | Not Available | + | 5458566 - 5459780 | 45115.8 |
| plasmid partitioning protein repb | EXZ48_25775 | Not Available | + | 5459777 - 5460778 | 37088.7 |
| replication initiation protein repc | EXZ48_25780 | Not Available | + | 5460980 - 5462197 | 44368.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.