Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding protein | EXZ48_25685 | Not Available | + | 5439980 - 5442076 | 75282.0 |
| fad:protein fmn transferase | EXZ48_25690 | Not Available | + | 5442073 - 5442951 | 30637.7 |
| transporter substrate-binding domain-containing protein | EXZ48_25695 | Not Available | - | 5442955 - 5443851 | 32209.5 |
| cytochrome c-550 pedf | EXZ48_25700 | Not Available | - | 5443857 - 5444543 | 24415.6 |
| branched-chain amino acid abc transporter substrate-binding protein | EXZ48_25705 | Not Available | + | 5444694 - 5445881 | 43180.5 |
| yvtn family beta-propeller repeat protein | EXZ48_25710 | Not Available | + | 5445883 - 5446848 | 34894.4 |
| hypothetical protein | EXZ48_25715 | Not Available | + | 5446870 - 5447328 | 15980.1 |
| atp-binding cassette domain-containing protein | EXZ48_25720 | Not Available | + | 5447335 - 5448048 | 25373.8 |
| multidrug abc transporter permease | EXZ48_25725 | Not Available | + | 5448045 - 5448887 | 30773.7 |
| sel1 repeat family protein | EXZ48_25730 | Not Available | + | 5448902 - 5449450 | 19696.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.