Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | EXZ48_25635 | Not Available | + | 5422829 - 5423020 | 6829.38 |
| biotin synthase biob | EXZ48_25640 | Not Available | - | 5423147 - 5424136 | 35623.3 |
| biotin transporter bioy | EXZ48_25645 | Not Available | - | 5424136 - 5424690 | 18916.8 |
| gntr family transcriptional regulator | EXZ48_25650 | Not Available | - | 5424774 - 5425442 | 25241.1 |
| hypothetical protein | EXZ48_25655 | Not Available | - | 5425793 - 5427307 | 52599.0 |
| glutamate synthase large subunit | EXZ48_25660 | Not Available | + | 5427487 - 5432970 | 197802.0 |
| sulfite reductase subunit alpha | EXZ48_25665 | Not Available | + | 5432981 - 5434729 | 62837.2 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | EXZ48_25670 | Not Available | - | 5434969 - 5437758 | 100260.0 |
| hypothetical protein | EXZ48_25675 | Not Available | - | 5438296 - 5438961 | 24173.2 |
| abc transporter permease | EXZ48_25680 | Not Available | - | 5439097 - 5439867 | 28551.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.