Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf882 domain-containing protein | EXZ48_01660 | Not Available | + | 370061 - 371833 | 62358.5 |
| duf2312 domain-containing protein | EXZ48_01665 | Not Available | - | 371963 - 372226 | 10003.0 |
| duf1244 domain-containing protein | EXZ48_01670 | Not Available | - | 372324 - 372629 | 11763.7 |
| n-formylglutamate amidohydrolase | EXZ48_01675 | Not Available | - | 372640 - 373428 | 28969.5 |
| duf1036 domain-containing protein | EXZ48_01680 | Not Available | + | 373557 - 374099 | 20038.8 |
| pyruvate kinase | EXZ48_01685 | Not Available | + | 374099 - 375538 | 51260.1 |
| alpha/beta hydrolase | EXZ48_01690 | Not Available | - | 375543 - 376550 | 36476.7 |
| hypothetical protein | EXZ48_01695 | Not Available | - | 376645 - 377262 | 22663.1 |
| 50s ribosomal protein l36 | EXZ48_01700 | Not Available | - | 377343 - 377468 | 5004.32 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | EXZ48_01705 | Not Available | - | 377682 - 378740 | 37757.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.