Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dmt family transporter | EXZ48_25480 | Not Available | - | 5386332 - 5387309 | 34181.5 |
| arac family transcriptional regulator | EXZ48_25485 | Not Available | + | 5387373 - 5388194 | 30513.6 |
| bile acid:sodium symporter family protein | EXZ48_25490 | Not Available | - | 5388220 - 5389089 | 29764.1 |
| twin-arginine translocation signal domain-containing protein | EXZ48_25495 | Not Available | - | 5389493 - 5390608 | 40663.2 |
| trap transporter large permease subunit | EXZ48_25500 | Not Available | - | 5390675 - 5392246 | 55496.2 |
| trap transporter small permease subunit | EXZ48_25505 | Not Available | - | 5392265 - 5392813 | 19968.8 |
| response regulator transcription factor | EXZ48_25510 | Not Available | - | 5392944 - 5393588 | 23054.1 |
| histidine kinase | EXZ48_25515 | Not Available | - | 5393585 - 5394976 | 50676.7 |
| arginine decarboxylase | EXZ48_25525 | Not Available | + | 5395993 - 5398284 | 83474.4 |
| arginine/agmatine antiporter | EXZ48_25530 | Not Available | + | 5398299 - 5399828 | 53441.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.