Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp protease atp-binding subunit | EXZ48_25425 | Not Available | - | 5376413 - 5376919 | 17678.2 |
| helix-turn-helix domain-containing protein | EXZ48_25430 | Not Available | - | 5376928 - 5377149 | 7919.43 |
| methyl-accepting chemotaxis protein | EXZ48_25435 | Not Available | - | 5377405 - 5379546 | 75907.4 |
| tlya family rna methyltransferase | EXZ48_25440 | Not Available | + | 5379832 - 5380584 | 26339.5 |
| class i sam-dependent rna methyltransferase | EXZ48_25445 | Not Available | + | 5380581 - 5381831 | 44415.9 |
| sdr family nad(p)-dependent oxidoreductase | EXZ48_25450 | Not Available | - | 5381839 - 5382597 | 26388.7 |
| chemotaxis protein | EXZ48_25455 | Not Available | - | 5382729 - 5383019 | 9673.32 |
| doxx family protein | EXZ48_25465 | Not Available | + | 5383749 - 5384372 | 22991.4 |
| abc transporter atp-binding protein | EXZ48_25470 | Not Available | - | 5384397 - 5386121 | 62752.3 |
| hypothetical protein | EXZ48_25475 | Not Available | - | 5386114 - 5386335 | 7394.61 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.