Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | EXZ48_25375 | Not Available | + | 5368878 - 5369828 | 33184.9 |
| histone deacetylase family protein | EXZ48_25380 | Not Available | + | 5369899 - 5370825 | 33579.4 |
| exodeoxyribonuclease vii small subunit | EXZ48_25385 | Not Available | + | 5370828 - 5371079 | 9106.75 |
| pirin family protein | EXZ48_25390 | Not Available | + | 5371282 - 5372205 | 33104.4 |
| transcriptional regulator | EXZ48_25395 | Not Available | + | 5372332 - 5372655 | 12102.5 |
| srpbcc domain-containing protein | EXZ48_25400 | Not Available | + | 5372652 - 5373050 | 15168.9 |
| hypothetical protein | EXZ48_25405 | Not Available | + | 5373089 - 5373307 | 8300.56 |
| duf1801 domain-containing protein | EXZ48_25410 | Not Available | + | 5373304 - 5373714 | 14965.9 |
| duf1801 domain-containing protein | EXZ48_25415 | Not Available | + | 5373732 - 5374145 | 15091.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | EXZ48_25420 | Not Available | + | 5374385 - 5376310 | 68333.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.