Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | EXZ48_25325 | Not Available | + | 5360021 - 5361121 | 39748.5 |
| hypothetical protein | EXZ48_25330 | Not Available | + | 5361205 - 5362164 | 34142.1 |
| winged helix-turn-helix domain-containing protein | EXZ48_25335 | Not Available | - | 5362161 - 5363360 | 46113.6 |
| abc transporter atp-binding protein | EXZ48_25340 | Not Available | + | 5363542 - 5364222 | 23960.2 |
| energy-coupling factor transporter transmembrane protein ecft | EXZ48_25345 | Not Available | + | 5364216 - 5364821 | 21951.6 |
| biotin transporter bioy | EXZ48_25350 | Not Available | + | 5364858 - 5365421 | 19207.5 |
| long-chain fatty acid--coa ligase | EXZ48_25355 | Not Available | + | 5365426 - 5366913 | 51490.8 |
| thiolase family protein | EXZ48_25360 | Not Available | + | 5366891 - 5368066 | 40121.6 |
| gfa family protein | EXZ48_25365 | Not Available | + | 5368075 - 5368470 | 13850.2 |
| acyl-coa thioesterase | EXZ48_25370 | Not Available | - | 5368456 - 5368797 | 12377.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.