Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
1276357 bp
Thymine Count
1306171 bp
Guanine Count
2269642 bp
Cytosine Count
2240299 bp
Genome Length
7093386 bp
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf459 domain-containing protein | EXZ48_01560 | Not Available | - | 345550 - 346698 | 41185.8 |
| lytic murein transglycosylase | EXZ48_01565 | Not Available | - | 346880 - 348100 | 44513.1 |
| utp--glucose-1-phosphate uridylyltransferase galu | EXZ48_01570 | Not Available | + | 348319 - 349206 | 32256.3 |
| hypothetical protein | EXZ48_01575 | Not Available | - | 349210 - 350724 | 54097.7 |
| hypothetical protein | EXZ48_01580 | Not Available | + | 351721 - 352479 | 27105.1 |
| linear amide c-n hydrolase | EXZ48_01585 | Not Available | + | 352528 - 353583 | 38443.3 |
| hypothetical protein | EXZ48_01590 | Not Available | + | 353836 - 354054 | 8178.66 |
| had-iib family hydrolase | EXZ48_01595 | Not Available | - | 354199 - 355047 | 31425.0 |
| kpsf/gutq family sugar-phosphate isomerase | EXZ48_01600 | Not Available | + | 355486 - 356481 | 34675.1 |
| nfed family protein | EXZ48_01605 | Not Available | - | 356542 - 357000 | 16798.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.