Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. JR1-6 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. JR1-6
Accession NumberSHMI00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
6605 genes
Non-Coding Genes
160 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phenylacetate-coa oxygenase subunit paaj | EXZ48_00810 | Not Available | + | 172006 - 172530 | 19234.0 |
| phenylacetate-coa oxygenase/reductase subunit paak | EXZ48_00815 | Not Available | + | 172654 - 173730 | 39804.5 |
| phenylacetic acid catabolic | EXZ48_00820 | Not Available | + | 173742 - 174497 | 27286.6 |
| phenylacetic acid degradation bifunctional protein paaz | EXZ48_00825 | Not Available | + | 174566 - 176623 | 72755.0 |
| acyl-coa thioesterase | EXZ48_00830 | Not Available | + | 176628 - 177131 | 18784.4 |
| tetr/acrr family transcriptional regulator | EXZ48_00835 | Not Available | - | 177139 - 177735 | 22182.9 |
| phenylacetate--coa ligase | EXZ48_00840 | Not Available | - | 177929 - 179239 | 48271.8 |
| hydroxyphenylacetyl-coa thioesterase paai | EXZ48_00845 | Not Available | - | 179281 - 179721 | 15711.5 |
| 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase | EXZ48_00850 | Not Available | - | 179718 - 180506 | 27629.0 |
| phenylacetic acid degradation protein paan | EXZ48_00855 | Not Available | + | 180607 - 182268 | 57754.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.